Toxicité des substances chimiques, Analyse Toxicologique.
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PS1 – Data Visualization
This article is Chapter I from the author's book Statistics and Probability Flashcards.
Definitions
Individuals and variables
In a dataset, the individuals are the items with one or more properties, called variables. Individuals can be events, cases, objects, people, etc.
Student (individuals)
Height (variables)
John
190 cm
Ali
175 cm
Paul
165 cm
Clara
160 cm
Table 1.1. example of a data set with items and variables.
Individuals and variables are called data. Table 1.1 is called a data table.
Here’s another example of a data table containing other variables:
Student
Height
Weight
Likes football
John
190 cm
100 kg
Yes
Ali
175 cm
90 kg
No
Paul
165 cm
60 kg
No
Clara
160 cm
63 kg
Yes
Table 1.2. example of a data set with items and more than 1 variable category.
Variables can be categorical or quantitative. In table 1.1 there’s one quantitative variable: the height whereas in table 1.2 there are two quantitative variables (height and weight), and one categorical variable (likes football).
Quantitative variables are numerical variables: counts, percents, or numbers.
Categorical variables are non-numerical variables. Their values aren’t represented with numbers: words, not numbers.
This data set presented in table 1.1 and table 1.2 is called one-way data because we have just a single individual (item) that has one or many properties attached to it.
How to build a data table?
When you build a data table, it is important to think about whether you have more individuals or more variables.
In tables 1.1 and 1.2 the number of individuals listed was greater than the number of variables. If we have many variables but only a few individuals, it is advisable to list the individuals across the top and the variables down the left side.
John
Ali
Height
190 cm
175 cm
Weight
90 kg
75 kg
Likes football
Yes
No
Likes pizza
Yes
Yes
Table 1.3. Since the number of variables is bigger than individuals, listing the variables vertically would make the data table more appropriate than if we had tried to list all the variables horizontally.
Data visualization
Bar graphs and pie charts
Two of the simplest ways to summarize and graphically represent data are bar graphs and pie charts.
Bar graphs apply a series of rectangular bars to show absolute values or proportions for each of the data categories whereas pie charts show how substantial each data category represents as a part or proportion of the whole, by using a circular format with different-sized “slices” for different percentages of the total.
Rank
Country
Oil production (bbl/day)
01
USA
15,043,000
02
Saudi Arabia (OPEC)
12,000,000
03
Russia
10,800,000
04
Iraq (OPEC)
4,451,516
05
Iran (OPEC)
3,990,956
06
China
3,980,650
07
Canada
3,662,694
08
United Arab Emirates (OPEC)
3,106,077
09
Kuwait (OPEC)
2,923,825
10
Brazil
2,515,459
Table 1.4. Top 10 world Oil producers ("Production of Crude Oil including Lease Condensate 2019" U.S. Energy Information Administration)
Figure 1. Bar chart - Top 10 world Oil producers ("Production of Crude Oil including Lease Condensate 2019" U.S. Energy Information Administration)
Notice that we have a list of the Oil producers (countries) across the bottom of the bar graph, with the count of the Oil production (bbl/day) up the left side.
The countries are the individuals, and the count is a quantitative variable because it represents the numeric property of each of the individuals. The bar graph is one of the best ways to represent this data because it is possible to get quickly an overview of which countries produce the most oil.
Figure 2. Pie chart - Top 10 world Oil producers ("Production of Crude Oil including Lease Condensate 2019" U.S. Energy Information Administration)
Now we can quickly see that the United States produces the most of the total oil daily, biggest than any other country, Saudi Arabia occupies second place, and Brazil is the 10th world's biggest oil producer.
Venn diagrams
A Venn diagram is a diagram that shows all possible logical relations between a finite collection of different sets from a two-way table.
Good
Cheap
Fast
Total
Expensive
10
0
10
20
Low quality
0
10
10
20
Slow delivery
10
10
0
20
Best choice
10
10
10
30
Other
20
20
20
60
Total
50
50
50
150
Table 1.5. two-way data table
Figure 3. Venn diagram
Box-and-whisker plots
Box-and-whisker plots (also called box plots) are a great method for graphically depicting groups of numerical data through their quartiles. It is very useful when you want to show the median and spread of the data (see chapter IV) at the same time.
Assuming that we have the following data set: [1, 2,2, 2, 3, 3, 4, 6, 8,8, 10, 11, 11, 16]:
Figure 4. Box-and-whisker chart
The horizontal line in the center of the box is the median of the data set, so the median of the data set represented in the chart above is 5.
The dot at the end of the bottom whisker is the minimum of the data set, and the dot at the top of the right whisker is the maximum of the data set. So in this plot, we can say that the minimum is 1, that the maximum is 16, so the range would be 16 − 1 = 15.
The IQR (interquartile range) is given by the ends of the box. Since the box above extends from 2 to 10.25, the IQR is 10.25 − 2 = 8.25.
We can summarize the information given by the Box-and-whisker chart above in the following table: